From 3025f8c21520a4485c9c97d8878afcd32f528cb6 Mon Sep 17 00:00:00 2001 From: Acetylsalicylsaeure <110168604+Acetylsalicylsaeure@users.noreply.github.com> Date: Sun, 23 Apr 2023 13:54:41 +0200 Subject: [PATCH] obabel: add page (#10096) * obabel: add page --------- Co-authored-by: Jack Lin --- pages/linux/obabel.md | 20 ++++++++++++++++++++ 1 file changed, 20 insertions(+) create mode 100644 pages/linux/obabel.md diff --git a/pages/linux/obabel.md b/pages/linux/obabel.md new file mode 100644 index 000000000..81ff99e5e --- /dev/null +++ b/pages/linux/obabel.md @@ -0,0 +1,20 @@ +# obabel + +> Translate chemistry-related data. +> More information: . + +- Convert a .mol file to XYZ coordinates: + +`obabel {{path/to/file.mol}} -O {{path/to/output_file.xyz}}` + +- Convert a SMILES string to a 500x500 picture: + +`obabel -:"{{SMILES}} -O {{path/to/output_file.png}} -xp 500` + +- Convert a file of SMILES string to separate 3D .mol files: + +`obabel {{path/to/file.smi}} -O {{path/to/output_file.mol}} --gen3D -m` + +- Render multiple inputs into one picture: + +`obabel {{path/to/file1}} {{path/to/file2}} -O {{path/to/output_file.png}}`